Fighting Cancer, One Slide at a Time

Product Cat. No.: GBS-077

For Research Use Only.

PLAG1(8q12) gene break apart probe reagent Instructions Manual

Product Name

PLAG1(8q12) gene break apart probe reagent

Package Specifications

10 Tests/box

Intended Usage

This kit performs fluorescence in situ hybridization staining on the basis of conventional staining, and provides auxiliary information for diagnosis for physicians. The test results are for clinical reference only and should not be used as the sole basis for clinical diagnosis.Clinicians should make comprehensive judgments on the test results based on factors such as the patient’s condition, drug indications,treatment response and other laboratory test indicators.

Detection Principle

The kit is based on fluorescence in situ hybridization technology. A nucleic acid probe islabeled with fluorescein. The target gene is detected with homologous complementary to the nucleic acid probe used. Both after denaturation, annealing and renaturation, the hybrid of the target gene and the nucleic acid probe can be formed, and the qualitative, quantitative or relative positioning analysis of the gene to be measured under the microscope can be performed by the fluorescence detection system.

Product Main Components

The kit consists of PLAG1 dual-color probes, as shown in Table 1.

Table 1: Kit composition

Component name Specifications Quantity Main components
PLAG1 dual color probe 100μL/Tube 1 PLAG1 orange probe ; PLAG1 green probe,

bitmap

Storage conditions & Validity

Keep sealed away from light at -20oC±5oC, and the validity period is 12 months. After the cover is opened, it can be sealed and stored in 2~8°C away from light within 24 hours. After the cover is opened, it should be sealed and stored in -20±5°C away from light for a long time. Transport with temperature below 0°C.

Applicable Instruments

Fluorescence microscopy imaging systems, including fluorescence microscopy and filter sets suitable for DAPI (367/452), Green (495/517),and Orange (547/565).

Sample Requirements

1. Applicable specimen types: Paraffin-embedded specimens from surgical excision or biopsy.
2. The tissue should be fixed with 4% neutral formaldehyde solution within 1 hour after isolation. After tissue fixation, it is routinely dehydrated and embedded in paraffin.

Testing Method

Instructions
1. Hybridization pretreatment
Baking: Slides heating at 80oC for 30min or 65oC for 2h or overnight.
Dewaxing: According to the customer laboratory protocol (Commonly with Xylene for 15min).
Hydration: Take out the slides and put them respectively into 100%, 85% and 70% EtOH at room temperature for 3 minutes each.
Take out the slides, and immerse them in deionized water for 3 minutes. Remove the excess of water on the slides by air-drying.
Permeation: Immerse the slides in deionized water at 100oC and boil continuously for 20-40 minutes (Conventional 20min). Remove the excess of water on the slides by air-drying.
Digestion: Protease enzymic digestion at 37°C for 10-40 minutes. Mix the protease work buffer (50mmol HCl) and the 10x protease solution (Pepsin concentration 5%) in a proportion of 9:1 to prepare the enzymatic digestion solution.
Washing: Wash with 2xSSC at room temperature for 5 minutes.
Dehydration: Take out the slides and dehydrate in 70%, 85%, and 100% gradient ethanol at room temperature for 2 minutes each time.Remove the excess of EtOH solution on the slides by air-drying.

2. Denaturation and Hybridization
The following operations should be performed in a darkroom.

  1. Take out the probe put at room temperature for 5min. Mix and centrifuge briefly. Take 10μl droplet in the cell and drop in the hybridization zone, immediately cover 22mmx22mm glass slide area; spread evenly without bubbles the probe under the glass slide covered area and seal edges with rubber (edge sealing must be thorough to prevent dry film from affecting the test results during hybridization).
  2. Place the glass slides in the hybridization instrument, denature at 85°C for 5 minutes (the hybridizer should be preheated to 85oC) and hybridize at 42°C for 2 to 16 hours.

3. Washing
The following operations should be performed in a darkroom.

  1. Carefully remove the sealing glue around the cover glass with tweezers to avoid sticking or moving the cover glass, immerse the sample in 2xSSC for about 5S, take it out, gently push a corner of the cover glass to the edge of the slide with tweezers, and gently remove the cover glass with tweezers;
  2. Place the sample at 2XSSC room temperature for 1 min;
  3. Take out the slides and immerse in a preheated at 68°C 0.3% NP-40/0.4xSSC (Preparation of 0.3% NP-40/0.4xSSC: For 1L preparation,take 3mL NP-40 and 20mL 20xSSC, dissolve fully, mix well, and use 1M NaOH to adjust the pH to 7.2) solution and wash for 2min.
  4. Take out the sample and immerse it in deionized water preheated at 37oC in advance for 1min; dry it naturally in the dark place.

4. Counterstaining
The following operations should be performed in a darkroom.
Dip 10μL of DAPI counterstain into the hybridization area of the glass slides, immediately cover with a lid and place in dark for 10-20min,then use the appropriate filter to observe the sections under the fluorescence microscope.

5. FISH results observation
Place the counterstained film under the fluorescence microscope, and first put it under the low-power objective lens (10x) confirm the cell area under the microscope; Go to 40x under the objective lens, find a position where the cells are evenly distributed; Then in the high-power objective (100x) the FISH results of nuclei were observed.

Positive judgment value or reference interval

PLAG1 gene site 5 signal
PLAG1 gene site 3 signal
dots

Negative: 2 fusion

dots

Positive: 1 orange 1 green 1 fusion

Precautions

1. This product is only used for in vitro diagnosis.
2. Please read this manual carefully before testing. The testing personnel should receive professional technical training, and the signal counting personnel must be able to observe and identify tangerine and green signals.
3.When testing clinical samples, when the hybridization signal count is difficult and the sample is insufficient for repeated retesting, or the cell count is insufficient for analysis, the test will not provide test results.
4. The DAPI dye used in this experiment has potential toxicity or carcinogenicity, and should be operated in a fume hood, wearing masks and gloves to avoid direct contact.
5. All chemicals have potential hazards and should be avoided from direct contact. Used reagent kits are clinical waste and should be properly disposed off.